Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.9■□□□□ 0.3
VCLP18206 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 AC108751.1-201ENST00000490852 363 ntBASIC16.9■□□□□ 0.3
VCLP18206 UNC93B6-202ENST00000528242 690 ntBASIC16.9■□□□□ 0.3
VCLP18206 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.9■□□□□ 0.3
VCLP18206 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
VCLP18206 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
VCLP18206 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VCLP18206 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.9■□□□□ 0.3
VCLP18206 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 AL590787.1-201ENST00000568856 1315 ntBASIC16.9■□□□□ 0.3
VCLP18206 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.9■□□□□ 0.3
VCLP18206 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VCLP18206 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCLP18206 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VCLP18206 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
VCLP18206 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VCLP18206 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.89■□□□□ 0.29
VCLP18206 PTCHD3P3-201ENST00000403073 906 ntBASIC16.89■□□□□ 0.29
VCLP18206 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.89■□□□□ 0.29
VCLP18206 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.89■□□□□ 0.29
VCLP18206 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.89■□□□□ 0.29
VCLP18206 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 AC106730.1-201ENST00000566722 1090 ntBASIC16.89■□□□□ 0.29
VCLP18206 AF228730.7-201ENST00000641842 219 ntBASIC16.89■□□□□ 0.29
VCLP18206 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.89■□□□□ 0.29
VCLP18206 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
VCLP18206 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.89■□□□□ 0.29
VCLP18206 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCLP18206 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 AC092053.1-201ENST00000605787 1936 ntBASIC16.88■□□□□ 0.29
VCLP18206 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 PI4KAP1-204ENST00000612579 1703 ntBASIC16.88■□□□□ 0.29
VCLP18206 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.88■□□□□ 0.29
VCLP18206 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 PMS2P1-201ENST00000431037 1228 ntBASIC16.88■□□□□ 0.29
VCLP18206 IGHV3-65-201ENST00000523210 341 ntBASIC16.88■□□□□ 0.29
VCLP18206 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.88■□□□□ 0.29
VCLP18206 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 AC092850.2-201ENST00000623821 2697 ntBASIC16.88■□□□□ 0.29
VCLP18206 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
VCLP18206 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.88■□□□□ 0.29
VCLP18206 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VCLP18206 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms