Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 KRT8P10-201ENST00000450021 1447 ntBASIC17.29■□□□□ 0.36
BRAFP15056 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
BRAFP15056 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 FGFR3P6-201ENST00000457012 610 ntBASIC17.28■□□□□ 0.36
BRAFP15056 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 AC019129.2-201ENST00000609837 1235 ntBASIC17.28■□□□□ 0.36
BRAFP15056 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 AL365203.3-201ENST00000609742 2057 ntBASIC17.28■□□□□ 0.36
BRAFP15056 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
BRAFP15056 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
BRAFP15056 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRAFP15056 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.28■□□□□ 0.36
BRAFP15056 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 ALOX12P2-203ENST00000570921 1945 ntBASIC17.27■□□□□ 0.36
BRAFP15056 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
BRAFP15056 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
BRAFP15056 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
BRAFP15056 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.27■□□□□ 0.36
BRAFP15056 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.27■□□□□ 0.36
BRAFP15056 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.27■□□□□ 0.36
BRAFP15056 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 RBM17P3-201ENST00000417687 1192 ntBASIC17.27■□□□□ 0.36
BRAFP15056 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.27■□□□□ 0.36
BRAFP15056 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.27■□□□□ 0.36
BRAFP15056 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.27■□□□□ 0.36
BRAFP15056 AC109462.3-201ENST00000573934 613 ntBASIC17.27■□□□□ 0.36
BRAFP15056 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.27■□□□□ 0.36
BRAFP15056 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.27■□□□□ 0.36
BRAFP15056 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.27■□□□□ 0.36
BRAFP15056 AP000867.4-201ENST00000641616 219 ntBASIC17.27■□□□□ 0.36
BRAFP15056 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.27■□□□□ 0.36
BRAFP15056 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRAFP15056 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
BRAFP15056 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRAFP15056 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
BRAFP15056 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRAFP15056 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BRAFP15056 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.27■□□□□ 0.35
BRAFP15056 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.27■□□□□ 0.35
BRAFP15056 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.27■□□□□ 0.35
BRAFP15056 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRAFP15056 AL391256.1-201ENST00000443260 1855 ntBASIC17.27■□□□□ 0.35
BRAFP15056 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRAFP15056 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
BRAFP15056 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.27■□□□□ 0.35
BRAFP15056 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
BRAFP15056 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms