Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNB1P11230 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNB1P11230 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CHRNB1P11230 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNB1P11230 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNB1P11230 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 AL035456.1-201ENST00000456064 1369 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNB1P11230 U91328.1-201ENST00000437528 223 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNB1P11230 MIR4492-201ENST00000581627 80 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 AC008738.7-201ENST00000609744 511 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNB1P11230 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 AC087499.5-201ENST00000452760 1342 ntBASIC16.9■□□□□ 0.3
CHRNB1P11230 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNB1P11230 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNB1P11230 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNB1P11230 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNB1P11230 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNB1P11230 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNB1P11230 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHRNB1P11230 KRT8P49-201ENST00000604166 1432 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 HLA-H-201ENST00000383620 1096 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 ARSEP1-201ENST00000420443 635 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRNB1P11230 ATP5G2P4-201ENST00000442175 420 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNB1P11230 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRNB1P11230 TEX28P1-201ENST00000613479 1221 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 TEX28P2-201ENST00000617764 1221 ntBASIC16.89■□□□□ 0.29
CHRNB1P11230 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNB1P11230 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNB1P11230 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNB1P11230 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNB1P11230 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNB1P11230 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNB1P11230 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNB1P11230 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHRNB1P11230 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNB1P11230 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNB1P11230 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNB1P11230 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNB1P11230 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNB1P11230 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHRNB1P11230 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms