Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RARBP10826 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.66■□□□□ 0.58
RARBP10826 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 MTND6P24-201ENST00000440466 518 ntBASIC18.66■□□□□ 0.58
RARBP10826 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.66■□□□□ 0.58
RARBP10826 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.66■□□□□ 0.58
RARBP10826 TP53TG3HP-202ENST00000569755 579 ntBASIC18.66■□□□□ 0.58
RARBP10826 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 TEX28P1-201ENST00000613479 1221 ntBASIC18.66■□□□□ 0.58
RARBP10826 TEX28P2-201ENST00000617764 1221 ntBASIC18.66■□□□□ 0.58
RARBP10826 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
RARBP10826 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARBP10826 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.65■□□□□ 0.58
RARBP10826 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 FOXO1B-201ENST00000504678 1527 ntBASIC18.65■□□□□ 0.58
RARBP10826 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.65■□□□□ 0.58
RARBP10826 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.65■□□□□ 0.58
RARBP10826 ATP5G2P4-201ENST00000442175 420 ntBASIC18.65■□□□□ 0.58
RARBP10826 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 AC009407.1-201ENST00000568958 598 ntBASIC18.65■□□□□ 0.58
RARBP10826 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.65■□□□□ 0.58
RARBP10826 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 AL132655.2-201ENST00000596276 594 ntBASIC18.65■□□□□ 0.58
RARBP10826 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.65■□□□□ 0.58
RARBP10826 AL589739.1-201ENST00000607720 493 ntBASIC18.65■□□□□ 0.58
RARBP10826 AC008738.7-201ENST00000609744 511 ntBASIC18.65■□□□□ 0.58
RARBP10826 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARBP10826 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
RARBP10826 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
RARBP10826 AC007541.1-201ENST00000570282 1469 ntBASIC18.65■□□□□ 0.58
RARBP10826 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.58
RARBP10826 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RARBP10826 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RARBP10826 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.64■□□□□ 0.57
RARBP10826 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.64■□□□□ 0.57
RARBP10826 SLC25A1P3-201ENST00000395415 828 ntBASIC18.64■□□□□ 0.57
RARBP10826 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.64■□□□□ 0.57
RARBP10826 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.64■□□□□ 0.57
RARBP10826 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.64■□□□□ 0.57
RARBP10826 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.64■□□□□ 0.57
RARBP10826 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.64■□□□□ 0.57
RARBP10826 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.64■□□□□ 0.57
RARBP10826 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RARBP10826 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RARBP10826 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.64■□□□□ 0.57
RARBP10826 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.64■□□□□ 0.57
RARBP10826 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARBP10826 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.63■□□□□ 0.57
RARBP10826 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARBP10826 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RARBP10826 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.63■□□□□ 0.57
RARBP10826 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RARBP10826 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARBP10826 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARBP10826 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARBP10826 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RARBP10826 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARBP10826 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms