Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
APOA4P06727 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.81■□□□□ 0.28
APOA4P06727 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.81■□□□□ 0.28
APOA4P06727 AC136632.2-201ENST00000512891 861 ntBASIC16.81■□□□□ 0.28
APOA4P06727 AL662844.1-201ENST00000546340 181 ntBASIC16.81■□□□□ 0.28
APOA4P06727 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.81■□□□□ 0.28
APOA4P06727 DUX4L17-201ENST00000557360 1267 ntBASIC16.81■□□□□ 0.28
APOA4P06727 AC105339.3-201ENST00000560043 636 ntBASIC16.81■□□□□ 0.28
APOA4P06727 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 AC148477.8-201ENST00000624298 468 ntBASIC16.81■□□□□ 0.28
APOA4P06727 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.81■□□□□ 0.28
APOA4P06727 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.81■□□□□ 0.28
APOA4P06727 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOA4P06727 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.81■□□□□ 0.28
APOA4P06727 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
APOA4P06727 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
APOA4P06727 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 AC243591.1-201ENST00000452967 1364 ntBASIC16.8■□□□□ 0.28
APOA4P06727 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 AP002414.1-201ENST00000391405 1147 ntBASIC16.8■□□□□ 0.28
APOA4P06727 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 PTCHD3P3-201ENST00000403073 906 ntBASIC16.8■□□□□ 0.28
APOA4P06727 KRT18P27-201ENST00000427733 1299 ntBASIC16.8■□□□□ 0.28
APOA4P06727 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 AC093909.1-201ENST00000504731 1122 ntBASIC16.8■□□□□ 0.28
APOA4P06727 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
APOA4P06727 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.8■□□□□ 0.28
APOA4P06727 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 AL805961.1-202ENST00000641562 540 ntBASIC16.8■□□□□ 0.28
APOA4P06727 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 AC006538.1-201ENST00000567905 1585 ntBASIC16.8■□□□□ 0.28
APOA4P06727 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 AC046158.3-201ENST00000624947 2558 ntBASIC16.8■□□□□ 0.28
APOA4P06727 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
APOA4P06727 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOA4P06727 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
APOA4P06727 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms