Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPNS1P04632 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CAPNS1P04632 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CAPNS1P04632 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 AC007950.2-201ENST00000615045 2347 ntBASIC16.68■□□□□ 0.26
CAPNS1P04632 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPNS1P04632 TFAMP1-201ENST00000412727 736 ntBASIC16.68■□□□□ 0.26
CAPNS1P04632 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 AC093214.1-201ENST00000511688 1107 ntBASIC16.68■□□□□ 0.26
CAPNS1P04632 OR7E47P-204ENST00000575924 449 ntBASIC16.68■□□□□ 0.26
CAPNS1P04632 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CAPNS1P04632 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 AC025580.3-201ENST00000617932 1424 ntBASIC16.68■□□□□ 0.26
CAPNS1P04632 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPNS1P04632 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPNS1P04632 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 AC005915.1-201ENST00000624912 2018 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 OR8S1-201ENST00000310194 1080 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPNS1P04632 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPNS1P04632 AC055876.3-201ENST00000431496 288 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 TSPY16P-201ENST00000449843 468 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPNS1P04632 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPNS1P04632 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 AC138649.4-201ENST00000612222 287 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
CAPNS1P04632 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CAPNS1P04632 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.67■□□□□ 0.26
CAPNS1P04632 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CAPNS1P04632 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPNS1P04632 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPNS1P04632 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAPNS1P04632 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPNS1P04632 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms