Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCRP04035 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 SPDYE19P-201ENST00000338590 713 ntBASIC18.76■□□□□ 0.59
HMGCRP04035 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.76■□□□□ 0.59
HMGCRP04035 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCRP04035 DOC2GP-202ENST00000514950 1163 ntBASIC18.76■□□□□ 0.59
HMGCRP04035 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.76■□□□□ 0.59
HMGCRP04035 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HMGCRP04035 AL079307.3-201ENST00000556114 283 ntBASIC18.76■□□□□ 0.59
HMGCRP04035 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HMGCRP04035 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCRP04035 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 MIR4492-201ENST00000581627 80 ntBASIC18.76■□□□□ 0.59
HMGCRP04035 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 AC138932.1-201ENST00000534164 6830 ntBASIC18.76■□□□□ 0.59
HMGCRP04035 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCRP04035 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCRP04035 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCRP04035 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
HMGCRP04035 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCRP04035 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.75■□□□□ 0.59
HMGCRP04035 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.75■□□□□ 0.59
HMGCRP04035 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCRP04035 CHCHD2P3-201ENST00000603038 451 ntBASIC18.75■□□□□ 0.59
HMGCRP04035 AL133215.2-201ENST00000609242 977 ntBASIC18.75■□□□□ 0.59
HMGCRP04035 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 AL021920.2-201ENST00000624828 1351 ntBASIC18.75■□□□□ 0.59
HMGCRP04035 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCRP04035 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
HMGCRP04035 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
HMGCRP04035 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCRP04035 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCRP04035 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMGCRP04035 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCRP04035 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCRP04035 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCRP04035 RN7SL618P-201ENST00000477850 296 ntBASIC18.74■□□□□ 0.59
HMGCRP04035 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.74■□□□□ 0.59
HMGCRP04035 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCRP04035 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HMGCRP04035 AC007431.3-201ENST00000623221 587 ntBASIC18.74■□□□□ 0.59
HMGCRP04035 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCRP04035 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HMGCRP04035 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCRP04035 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HMGCRP04035 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCRP04035 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HMGCRP04035 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HMGCRP04035 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HMGCRP04035 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCRP04035 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCRP04035 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCRP04035 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms