Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
COL1A1P02452 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.94■□□□□ 0.78
COL1A1P02452 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.94■□□□□ 0.78
COL1A1P02452 AC106820.2-201ENST00000563775 3264 ntBASIC19.94■□□□□ 0.78
COL1A1P02452 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
COL1A1P02452 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL1A1P02452 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A1P02452 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A1P02452 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A1P02452 AL596325.1-201ENST00000563991 1082 ntBASIC19.93■□□□□ 0.78
COL1A1P02452 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.93■□□□□ 0.78
COL1A1P02452 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.93■□□□□ 0.78
COL1A1P02452 AL590560.3-201ENST00000623350 461 ntBASIC19.93■□□□□ 0.78
COL1A1P02452 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 HLA-A-202ENST00000376806 1854 ntBASIC19.93■□□□□ 0.78
COL1A1P02452 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A1P02452 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
COL1A1P02452 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A1P02452 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.93■□□□□ 0.78
COL1A1P02452 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.92■□□□□ 0.78
COL1A1P02452 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.92■□□□□ 0.78
COL1A1P02452 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 AL844908.2-201ENST00000609461 460 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL1A1P02452 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.92■□□□□ 0.78
COL1A1P02452 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.92■□□□□ 0.78
COL1A1P02452 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL1A1P02452 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
COL1A1P02452 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 SPTLC1P1-201ENST00000447199 261 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.92■□□□□ 0.78
COL1A1P02452 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.92■□□□□ 0.78
COL1A1P02452 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.92■□□□□ 0.78
COL1A1P02452 RNA5SP410-201ENST00000516285 106 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 AC027369.6-201ENST00000525520 931 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A1P02452 TEX28P1-201ENST00000613479 1221 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 TEX28P2-201ENST00000617764 1221 ntBASIC19.92■□□□□ 0.78
COL1A1P02452 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A1P02452 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A1P02452 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A1P02452 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A1P02452 AC080080.1-201ENST00000625121 2420 ntBASIC19.91■□□□□ 0.78
COL1A1P02452 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 LETM1P2-201ENST00000597330 2178 ntBASIC19.91■□□□□ 0.78
COL1A1P02452 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A1P02452 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms