Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VAPBO95292 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.85■□□□□ 0.29
VAPBO95292 MIR4492-201ENST00000581627 80 ntBASIC16.85■□□□□ 0.29
VAPBO95292 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 GGTLC5P-201ENST00000617623 998 ntBASIC16.85■□□□□ 0.29
VAPBO95292 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.85■□□□□ 0.29
VAPBO95292 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 AC005052.1-201ENST00000625181 2492 ntBASIC16.85■□□□□ 0.29
VAPBO95292 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VAPBO95292 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.85■□□□□ 0.29
VAPBO95292 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.85■□□□□ 0.29
VAPBO95292 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.84■□□□□ 0.29
VAPBO95292 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 AL671710.1-201ENST00000610245 2349 ntBASIC16.84■□□□□ 0.29
VAPBO95292 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 AC018712.1-201ENST00000455767 687 ntBASIC16.84■□□□□ 0.29
VAPBO95292 AF186996.4-201ENST00000467186 377 ntBASIC16.84■□□□□ 0.29
VAPBO95292 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.84■□□□□ 0.29
VAPBO95292 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.84■□□□□ 0.29
VAPBO95292 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 AC105339.3-201ENST00000560043 636 ntBASIC16.84■□□□□ 0.29
VAPBO95292 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 RN7SL510P-201ENST00000581311 263 ntBASIC16.84■□□□□ 0.29
VAPBO95292 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
VAPBO95292 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 MIR1199-201ENST00000621445 119 ntBASIC16.84■□□□□ 0.29
VAPBO95292 AL691432.3-201ENST00000621860 400 ntBASIC16.84■□□□□ 0.29
VAPBO95292 AC148477.8-201ENST00000624298 468 ntBASIC16.84■□□□□ 0.29
VAPBO95292 LINC02199-201ENST00000506655 2702 ntBASIC16.84■□□□□ 0.29
VAPBO95292 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 SNX33P1-201ENST00000592116 1762 ntBASIC16.84■□□□□ 0.29
VAPBO95292 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
VAPBO95292 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.84■□□□□ 0.29
VAPBO95292 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VAPBO95292 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VAPBO95292 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms