Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AL662844.1-201ENST00000546340 181 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFS3O75489 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFS3O75489 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 AP001005.1-201ENST00000571755 1248 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 AL049840.3-201ENST00000602669 611 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.72■□□□□ 0.27
NDUFS3O75489 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFS3O75489 AC004790.2-201ENST00000623588 572 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 AC117500.6-201ENST00000624871 588 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NDUFS3O75489 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS3O75489 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS3O75489 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS3O75489 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS3O75489 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NDUFS3O75489 AL353732.1-201ENST00000569618 1459 ntBASIC16.72■□□□□ 0.27
NDUFS3O75489 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NDUFS3O75489 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS3O75489 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS3O75489 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
NDUFS3O75489 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS3O75489 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS3O75489 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
NDUFS3O75489 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 AC005412.3-201ENST00000580309 715 ntBASIC16.71■□□□□ 0.27
NDUFS3O75489 MIR4492-201ENST00000581627 80 ntBASIC16.71■□□□□ 0.27
NDUFS3O75489 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
NDUFS3O75489 MIR7706-201ENST00000613747 67 ntBASIC16.71■□□□□ 0.27
NDUFS3O75489 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.71■□□□□ 0.27
NDUFS3O75489 AP001350.2-201ENST00000625104 1094 ntBASIC16.71■□□□□ 0.27
NDUFS3O75489 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS3O75489 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS3O75489 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS3O75489 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS3O75489 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS3O75489 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
NDUFS3O75489 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFS3O75489 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
NDUFS3O75489 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
NDUFS3O75489 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.7■□□□□ 0.26
NDUFS3O75489 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NDUFS3O75489 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NDUFS3O75489 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.7■□□□□ 0.26
NDUFS3O75489 PMS2P1-201ENST00000431037 1228 ntBASIC16.7■□□□□ 0.26
NDUFS3O75489 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.7■□□□□ 0.26
NDUFS3O75489 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.7■□□□□ 0.26
NDUFS3O75489 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.7■□□□□ 0.26
NDUFS3O75489 AC116407.3-201ENST00000623905 1129 ntBASIC16.7■□□□□ 0.26
NDUFS3O75489 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
NDUFS3O75489 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS3O75489 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS3O75489 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NDUFS3O75489 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFS3O75489 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFS3O75489 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
NDUFS3O75489 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.69■□□□□ 0.26
NDUFS3O75489 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms