Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KLHL41O60662 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 FRMD8P1-201ENST00000440433 1524 ntBASIC16.7■□□□□ 0.26
KLHL41O60662 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KLHL41O60662 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL41O60662 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 AL031284.1-201ENST00000419297 478 ntBASIC16.69■□□□□ 0.26
KLHL41O60662 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
KLHL41O60662 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.69■□□□□ 0.26
KLHL41O60662 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.69■□□□□ 0.26
KLHL41O60662 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KLHL41O60662 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KLHL41O60662 AC022188.1-201ENST00000620960 1664 ntBASIC16.69■□□□□ 0.26
KLHL41O60662 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KLHL41O60662 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 ALOX12P2-203ENST00000570921 1945 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
KLHL41O60662 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 TP73-AS1-210ENST00000637775 1455 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
KLHL41O60662 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 AP000347.1-202ENST00000435868 847 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 AC132008.2-207ENST00000454517 770 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.68■□□□□ 0.26
KLHL41O60662 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 RNPS1P1-201ENST00000507437 918 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.68■□□□□ 0.26
KLHL41O60662 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
KLHL41O60662 AL355877.3-201ENST00000622820 899 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
KLHL41O60662 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 MST1L-201ENST00000442552 2185 ntBASIC16.68■□□□□ 0.26
KLHL41O60662 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
KLHL41O60662 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
KLHL41O60662 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms