Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.61□□□□□ -0.39
SNAI2O43623 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 ZNF444P1-201ENST00000559497 298 ntBASIC12.61□□□□□ -0.39
SNAI2O43623 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.61□□□□□ -0.39
SNAI2O43623 AL031432.5-201ENST00000641059 760 ntBASIC12.61□□□□□ -0.39
SNAI2O43623 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SNAI2O43623 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SNAI2O43623 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SNAI2O43623 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SNAI2O43623 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.6□□□□□ -0.39
SNAI2O43623 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SNAI2O43623 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 MIR662-201ENST00000384847 95 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 STARP1-201ENST00000397973 869 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 SPDYE15P-201ENST00000424157 909 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 AC122714.2-201ENST00000502787 707 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SNAI2O43623 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 AC111152.3-201ENST00000569699 673 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.6□□□□□ -0.39
SNAI2O43623 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 AC140113.3-201ENST00000605663 199 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 FRMD8P1-201ENST00000440433 1524 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SNAI2O43623 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNAI2O43623 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SNAI2O43623 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SNAI2O43623 KRT18P22-201ENST00000402024 1347 ntBASIC12.6□□□□□ -0.39
SNAI2O43623 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
SNAI2O43623 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNAI2O43623 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNAI2O43623 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.59□□□□□ -0.39
SNAI2O43623 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNAI2O43623 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 LINC01568-207ENST00000641790 1380 ntBASIC12.59□□□□□ -0.39
SNAI2O43623 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.59□□□□□ -0.39
SNAI2O43623 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNAI2O43623 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNAI2O43623 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNAI2O43623 AC007967.3-201ENST00000434308 558 ntBASIC12.59□□□□□ -0.39
SNAI2O43623 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.59□□□□□ -0.39
SNAI2O43623 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.59□□□□□ -0.39
SNAI2O43623 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNAI2O43623 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms