Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC105020.1-201ENST00000435356 2205 ntBASIC17.23■□□□□ 0.35
COCHO43405 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 AC073439.1-201ENST00000624121 1774 ntBASIC17.23■□□□□ 0.35
COCHO43405 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.22■□□□□ 0.35
COCHO43405 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 FOXO1B-201ENST00000504678 1527 ntBASIC17.22■□□□□ 0.35
COCHO43405 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.22■□□□□ 0.35
COCHO43405 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.22■□□□□ 0.35
COCHO43405 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.22■□□□□ 0.35
COCHO43405 AC005498.2-205ENST00000593218 784 ntBASIC17.22■□□□□ 0.35
COCHO43405 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.22■□□□□ 0.35
COCHO43405 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
COCHO43405 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COCHO43405 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
COCHO43405 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.21■□□□□ 0.35
COCHO43405 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
COCHO43405 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.21■□□□□ 0.35
COCHO43405 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.21■□□□□ 0.35
COCHO43405 MIR6080-201ENST00000617359 66 ntBASIC17.21■□□□□ 0.35
COCHO43405 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.21■□□□□ 0.35
COCHO43405 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
COCHO43405 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COCHO43405 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COCHO43405 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.21■□□□□ 0.34
COCHO43405 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
COCHO43405 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COCHO43405 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
COCHO43405 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
COCHO43405 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
COCHO43405 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
COCHO43405 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COCHO43405 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.2■□□□□ 0.34
COCHO43405 SPDYE7P-202ENST00000420373 878 ntBASIC17.2■□□□□ 0.34
COCHO43405 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COCHO43405 KLF2P3-201ENST00000451977 1087 ntBASIC17.2■□□□□ 0.34
COCHO43405 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 AL390955.2-201ENST00000603032 514 ntBASIC17.2■□□□□ 0.34
COCHO43405 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.2■□□□□ 0.34
COCHO43405 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
COCHO43405 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.2■□□□□ 0.34
COCHO43405 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COCHO43405 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.2■□□□□ 0.34
COCHO43405 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.2■□□□□ 0.34
COCHO43405 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.2■□□□□ 0.34
COCHO43405 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COCHO43405 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COCHO43405 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms