Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 AC092474.2-201ENST00000424288 719 ntBASIC17.36■□□□□ 0.37
MSI1O43347 AL671277.1-201ENST00000429656 993 ntBASIC17.36■□□□□ 0.37
MSI1O43347 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.36■□□□□ 0.37
MSI1O43347 AP006288.1-201ENST00000446065 395 ntBASIC17.36■□□□□ 0.37
MSI1O43347 TIMM8BP1-201ENST00000452384 211 ntBASIC17.36■□□□□ 0.37
MSI1O43347 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.36■□□□□ 0.37
MSI1O43347 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.36■□□□□ 0.37
MSI1O43347 AP002490.2-201ENST00000524791 560 ntBASIC17.36■□□□□ 0.37
MSI1O43347 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.36■□□□□ 0.37
MSI1O43347 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.36■□□□□ 0.37
MSI1O43347 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 AD000864.1-201ENST00000624076 2295 ntBASIC17.36■□□□□ 0.37
MSI1O43347 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 KRT8P48-201ENST00000515599 1220 ntBASIC17.35■□□□□ 0.37
MSI1O43347 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MSI1O43347 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.35■□□□□ 0.37
MSI1O43347 AP001160.2-201ENST00000596071 487 ntBASIC17.35■□□□□ 0.37
MSI1O43347 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.35■□□□□ 0.37
MSI1O43347 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 AC011676.5-201ENST00000624864 2660 ntBASIC17.35■□□□□ 0.37
MSI1O43347 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 AC016027.1-202ENST00000607927 1699 ntBASIC17.35■□□□□ 0.37
MSI1O43347 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
MSI1O43347 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSI1O43347 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MSI1O43347 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.34■□□□□ 0.37
MSI1O43347 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 KRT8P39-201ENST00000396270 1433 ntBASIC17.34■□□□□ 0.37
MSI1O43347 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 PMS2P4-201ENST00000412466 1052 ntBASIC17.34■□□□□ 0.37
MSI1O43347 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.34■□□□□ 0.37
MSI1O43347 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 AL135744.1-201ENST00000565098 629 ntBASIC17.34■□□□□ 0.37
MSI1O43347 RARRES2P8-201ENST00000566335 367 ntBASIC17.34■□□□□ 0.37
MSI1O43347 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.34■□□□□ 0.37
MSI1O43347 MIR3909-201ENST00000579518 119 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms