Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 DOC2GP-204ENST00000639052 2548 ntBASIC14.54□□□□□ -0.08
PHF1O43189 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PHF1O43189 KLF4P1-201ENST00000412782 1185 ntBASIC14.54□□□□□ -0.08
PHF1O43189 SPDYE21P-201ENST00000413323 827 ntBASIC14.54□□□□□ -0.08
PHF1O43189 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.54□□□□□ -0.08
PHF1O43189 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 IGHV3-52-201ENST00000519770 353 ntBASIC14.54□□□□□ -0.08
PHF1O43189 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.54□□□□□ -0.08
PHF1O43189 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 AC105339.3-201ENST00000560043 636 ntBASIC14.54□□□□□ -0.08
PHF1O43189 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.54□□□□□ -0.08
PHF1O43189 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 AL022326.1-202ENST00000641533 845 ntBASIC14.54□□□□□ -0.08
PHF1O43189 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 AL353593.2-201ENST00000602529 1483 ntBASIC14.54□□□□□ -0.08
PHF1O43189 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 AC005915.1-201ENST00000624912 2018 ntBASIC14.54□□□□□ -0.08
PHF1O43189 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.54□□□□□ -0.08
PHF1O43189 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PHF1O43189 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHF1O43189 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 AC063926.3-201ENST00000624734 5658 ntBASIC14.53□□□□□ -0.08
PHF1O43189 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.53□□□□□ -0.08
PHF1O43189 MIR770-201ENST00000390219 98 ntBASIC14.53□□□□□ -0.08
PHF1O43189 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.53□□□□□ -0.08
PHF1O43189 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 AL020989.1-201ENST00000422979 469 ntBASIC14.53□□□□□ -0.08
PHF1O43189 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.53□□□□□ -0.08
PHF1O43189 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.53□□□□□ -0.08
PHF1O43189 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.53□□□□□ -0.08
PHF1O43189 AC005829.1-201ENST00000570002 483 ntBASIC14.53□□□□□ -0.08
PHF1O43189 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.53□□□□□ -0.08
PHF1O43189 AC106028.4-201ENST00000614509 607 ntBASIC14.53□□□□□ -0.08
PHF1O43189 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PHF1O43189 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 AC046158.3-201ENST00000624947 2558 ntBASIC14.53□□□□□ -0.08
PHF1O43189 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 AC079328.2-201ENST00000561241 3354 ntBASIC14.53□□□□□ -0.08
PHF1O43189 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHF1O43189 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PHF1O43189 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PHF1O43189 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms