Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.54■■□□□ 1.2
PER1O15534 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.54■■□□□ 1.2
PER1O15534 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 AL691403.2-201ENST00000618460 490 ntBASIC22.54■■□□□ 1.2
PER1O15534 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PER1O15534 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.54■■□□□ 1.2
PER1O15534 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PER1O15534 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
PER1O15534 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
PER1O15534 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PER1O15534 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC22.53■■□□□ 1.2
PER1O15534 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.53■■□□□ 1.2
PER1O15534 AL627223.1-201ENST00000416693 442 ntBASIC22.53■■□□□ 1.2
PER1O15534 AL592309.1-201ENST00000443127 649 ntBASIC22.53■■□□□ 1.2
PER1O15534 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.53■■□□□ 1.2
PER1O15534 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.53■■□□□ 1.2
PER1O15534 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 KRT8P23-201ENST00000560090 1207 ntBASIC22.53■■□□□ 1.2
PER1O15534 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.53■■□□□ 1.2
PER1O15534 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
PER1O15534 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.53■■□□□ 1.2
PER1O15534 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC22.53■■□□□ 1.2
PER1O15534 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PER1O15534 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC22.53■■□□□ 1.2
PER1O15534 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER1O15534 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC22.52■■□□□ 1.2
PER1O15534 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.52■■□□□ 1.2
PER1O15534 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PER1O15534 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PER1O15534 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 AC005622.1-201ENST00000636801 1703 ntBASIC22.52■■□□□ 1.2
PER1O15534 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.52■■□□□ 1.2
PER1O15534 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.52■■□□□ 1.2
PER1O15534 PRYP6-201ENST00000514804 343 ntBASIC22.52■■□□□ 1.2
PER1O15534 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.52■■□□□ 1.2
PER1O15534 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PER1O15534 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PER1O15534 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.52■■□□□ 1.2
PER1O15534 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC22.52■■□□□ 1.2
PER1O15534 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER1O15534 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PER1O15534 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
PER1O15534 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC22.51■■□□□ 1.19
PER1O15534 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 AL139400.1-201ENST00000366220 510 ntBASIC22.51■■□□□ 1.19
PER1O15534 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
PER1O15534 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 CNN2P11-201ENST00000429351 262 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms