Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.9■□□□□ 0.14
UPK1AO00322 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1AO00322 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1AO00322 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1AO00322 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 AL021920.2-201ENST00000624828 1351 ntBASIC15.89■□□□□ 0.13
UPK1AO00322 AC092850.2-201ENST00000623821 2697 ntBASIC15.89■□□□□ 0.13
UPK1AO00322 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.89■□□□□ 0.13
UPK1AO00322 AC004870.1-201ENST00000315132 882 ntBASIC15.89■□□□□ 0.13
UPK1AO00322 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 HNRNPDP1-201ENST00000439535 754 ntBASIC15.89■□□□□ 0.13
UPK1AO00322 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.89■□□□□ 0.13
UPK1AO00322 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.89■□□□□ 0.13
UPK1AO00322 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.89■□□□□ 0.13
UPK1AO00322 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK1AO00322 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.89■□□□□ 0.13
UPK1AO00322 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
UPK1AO00322 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 AC073621.1-201ENST00000392730 636 ntBASIC15.88■□□□□ 0.13
UPK1AO00322 KRT18P67-201ENST00000432816 1264 ntBASIC15.88■□□□□ 0.13
UPK1AO00322 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.88■□□□□ 0.13
UPK1AO00322 FAAHP1-202ENST00000446499 1238 ntBASIC15.88■□□□□ 0.13
UPK1AO00322 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.88■□□□□ 0.13
UPK1AO00322 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.88■□□□□ 0.13
UPK1AO00322 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UPK1AO00322 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UPK1AO00322 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 PI4KAP1-204ENST00000612579 1703 ntBASIC15.88■□□□□ 0.13
UPK1AO00322 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK1AO00322 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK1AO00322 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms