Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.81■□□□□ 0.6
DDX39AO00148 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX39AO00148 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX39AO00148 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 AC105020.1-201ENST00000435356 2205 ntBASIC18.8■□□□□ 0.6
DDX39AO00148 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 PMS2P2-201ENST00000425039 1128 ntBASIC18.8■□□□□ 0.6
DDX39AO00148 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX39AO00148 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX39AO00148 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DDX39AO00148 AC243562.1-201ENST00000560672 389 ntBASIC18.8■□□□□ 0.6
DDX39AO00148 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX39AO00148 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX39AO00148 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DDX39AO00148 RNF216P1-203ENST00000404404 2427 ntBASIC18.8■□□□□ 0.6
DDX39AO00148 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX39AO00148 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DDX39AO00148 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DDX39AO00148 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 SNX33P1-201ENST00000592116 1762 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX39AO00148 PMS2P4-201ENST00000412466 1052 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 AL592309.1-201ENST00000443127 649 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX39AO00148 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX39AO00148 FAM86C2P-203ENST00000528684 1004 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 AC093520.2-201ENST00000561830 333 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX39AO00148 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX39AO00148 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 AC022211.2-201ENST00000585075 2527 ntBASIC18.79■□□□□ 0.6
DDX39AO00148 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
DDX39AO00148 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX39AO00148 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX39AO00148 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 WASH6P-202ENST00000359512 1437 ntBASIC18.78■□□□□ 0.6
DDX39AO00148 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 AC005237.2-201ENST00000434368 219 ntBASIC18.78■□□□□ 0.6
DDX39AO00148 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX39AO00148 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms