Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC004449.1-201ENST00000564240 433 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC106028.4-201ENST00000614509 607 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AL513210.1-201ENST00000629608 234 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 TIMM8BP1-201ENST00000452384 211 ntBASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 MIR4515-201ENST00000584082 81 ntBASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA3F8WFD2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 FRMD8P1-201ENST00000440433 1524 ntBASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 AL671277.1-201ENST00000429656 993 ntBASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 CYMP-203ENST00000474680 1263 ntBASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 AC093028.1-201ENST00000622998 982 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms