Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 AL359258.3-201ENST00000622910 2331 ntBASIC11.82□□□□□ -0.52
LINC01546A6NGU7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01546A6NGU7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 MIR662-201ENST00000384847 95 ntBASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ECEL1P3-201ENST00000427961 737 ntBASIC11.81□□□□□ -0.52
LINC01546A6NGU7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 NUS1P1-201ENST00000446295 882 ntBASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 AP000525.1-201ENST00000608286 694 ntBASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.81□□□□□ -0.52
LINC01546A6NGU7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01546A6NGU7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC087481.3-201ENST00000602886 1894 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 PRAL-201ENST00000624952 3286 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AL390955.1-201ENST00000428694 934 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 KRT18P6-201ENST00000555540 1265 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AL353801.3-201ENST00000609898 542 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 FAM87A-204ENST00000613235 858 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms