Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AL589987.1-201ENST00000453380 819 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC061975.2-201ENST00000581722 295 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC093726.1-201ENST00000608064 963 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 IMPDH1P4-201ENST00000445028 1534 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 DPM2-202ENST00000373110 738 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 HIST1H2BPS3-201ENST00000419683 341 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 RPL28-204ENST00000431533 590 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 KRT223P-202ENST00000449164 1292 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC007389.4-201ENST00000454674 793 ntBASIC22.38■■□□□ 1.17
SBNO1A3KN83 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.38■■□□□ 1.17
SBNO1A3KN83 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBNO1A3KN83 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 SNX33P1-201ENST00000592116 1762 ntBASIC22.37■■□□□ 1.17
SBNO1A3KN83 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 VMO1-203ENST00000416307 712 ntTSL 2 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 AC245100.3-201ENST00000441281 285 ntBASIC22.37■■□□□ 1.17
SBNO1A3KN83 AC234783.1-201ENST00000441761 496 ntBASIC22.37■■□□□ 1.17
SBNO1A3KN83 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC22.37■■□□□ 1.17
SBNO1A3KN83 AC092337.1-201ENST00000568699 1129 ntBASIC22.37■■□□□ 1.17
SBNO1A3KN83 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SBNO1A3KN83 AC006277.1-201ENST00000624348 1610 ntBASIC22.37■■□□□ 1.17
SBNO1A3KN83 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 AC092053.1-201ENST00000605787 1936 ntBASIC22.36■■□□□ 1.17
SBNO1A3KN83 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 AC068880.1-201ENST00000507289 2297 ntBASIC22.36■■□□□ 1.17
SBNO1A3KN83 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SBNO1A3KN83 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 PACS1-203ENST00000524815 628 ntTSL 4 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 RRP7BP-205ENST00000566851 833 ntBASIC22.36■■□□□ 1.17
SBNO1A3KN83 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 AC008735.3-201ENST00000596646 500 ntBASIC22.36■■□□□ 1.17
SBNO1A3KN83 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.36■■□□□ 1.17
SBNO1A3KN83 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms