Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 MIR4751-201ENST00000578027 74 ntBASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 AC005412.3-201ENST00000580309 715 ntBASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 AC010654.1-201ENST00000615722 808 ntBASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC162PA2VCL2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC162PA2VCL2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ACTL9-202ENST00000612068 1252 ntBASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC162PA2VCL2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms