Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 BNIP3P18-201ENST00000593976 575 ntBASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 MIR600HG-201ENST00000449175 5984 ntBASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 INTS4P1-201ENST00000438455 1935 ntBASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 AL365209.1-201ENST00000624418 6473 ntBASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF103-CHMP3A0A140T963 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC074051.2-201ENST00000565115 352 ntBASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 AP000550.4-202ENST00000639755 178 ntBASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF103-CHMP3A0A140T963 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF103-CHMP3A0A140T963 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms