Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 AL008721.1-201ENST00000609964 604 ntBASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AC068880.1-201ENST00000507289 2297 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 CU639417.3-201ENST00000624240 1404 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AC087499.5-201ENST00000452760 1342 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 MTND6P24-201ENST00000440466 518 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AC009477.1-201ENST00000452936 217 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 AL359881.2-201ENST00000602973 570 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 SPTSSB-204ENST00000617024 1292 ntBASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC187A0A096LP49 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AL589739.1-201ENST00000607720 493 ntBASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 TEX28P1-201ENST00000613479 1221 ntBASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 TEX28P2-201ENST00000617764 1221 ntBASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 AC116353.5-201ENST00000638148 1699 ntBASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 FOXO1B-201ENST00000504678 1527 ntBASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms