Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 AC016027.1-202ENST00000607927 1699 ntBASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC4A7Q9Y6M7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AC011270.2-201ENST00000624293 2550 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 RARRES2P9-201ENST00000565168 469 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AL138918.1-201ENST00000568306 659 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 MIR3909-201ENST00000579518 119 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 MIR6799-201ENST00000620297 69 ntBASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC4A7Q9Y6M7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 AC007967.4-201ENST00000614700 386 ntBASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 LINC01451-201ENST00000623792 534 ntBASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 AC067852.2-201ENST00000590513 2313 ntBASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 FLJ13224-201ENST00000313737 1514 ntBASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC4A7Q9Y6M7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 AC138969.3-201ENST00000546612 1459 ntBASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 AC138932.2-201ENST00000548268 1459 ntBASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 AC126755.4-201ENST00000549796 1459 ntBASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC4A7Q9Y6M7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms