Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 AC024909.3-201ENST00000611513 2257 ntBASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA3Q9Y5H8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA3Q9Y5H8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AC006504.4-201ENST00000592118 1568 ntBASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AL805961.1-202ENST00000641562 540 ntBASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 SLC22A20-204ENST00000530038 1673 ntBASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHA3Q9Y5H8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AC105917.1-201ENST00000506637 2539 ntBASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 PMS2P1-201ENST00000431037 1228 ntBASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 SCARNA2-201ENST00000458748 420 ntBASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AC025062.2-201ENST00000605477 670 ntBASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms