Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AC004835.2-201ENST00000603762 682 ntBASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 REXO1L3P-201ENST00000622202 1288 ntBASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AC092902.6-201ENST00000641783 218 ntBASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 FLJ38576-201ENST00000623820 2459 ntBASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 TSEN15P1-201ENST00000423257 515 ntBASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA3Q9Y5H0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 PAWRP1-201ENST00000451083 565 ntBASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 AC105339.1-204ENST00000636249 355 ntBASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 CROCCP2-202ENST00000412962 2773 ntBASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA3Q9Y5H0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms