Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC069335.1-201ENST00000489972 472 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC109322.1-201ENST00000524499 1264 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 RFPL4AP1-201ENST00000530883 850 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC025678.2-201ENST00000562061 970 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC013467.2-201ENST00000605472 835 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC106028.4-201ENST00000614509 607 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC009093.7-201ENST00000623853 1223 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 AC060834.1-201ENST00000443027 2032 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LINC00588Q9Y4M8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL645608.8-201ENST00000606034 2086 ntBASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 CYMP-203ENST00000474680 1263 ntBASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 KRT8P23-201ENST00000560090 1207 ntBASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms