Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.91■□□□□ 0.94
RTCBQ9Y3I0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 KRT8P12-202ENST00000472924 1397 ntBASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AL512343.1-201ENST00000605837 169 ntBASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 AC004461.2-201ENST00000629517 803 ntBASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RTCBQ9Y3I0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.89■□□□□ 0.94
RTCBQ9Y3I0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 SDHAP3-202ENST00000515467 728 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 AC023310.3-201ENST00000557027 670 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 AC100756.1-201ENST00000562736 682 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 AC138749.3-201ENST00000567691 622 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 CTBP2P3-201ENST00000585629 1255 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 AC116165.1-201ENST00000611806 668 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 HCG11-201ENST00000411553 5696 ntBASIC20.89■□□□□ 0.93
RTCBQ9Y3I0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 ELK1P1-201ENST00000485699 580 ntBASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AC092658.1-201ENST00000505836 891 ntBASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AC024267.1-201ENST00000582320 895 ntBASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AC099568.2-201ENST00000609194 695 ntBASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 AL138688.1-201ENST00000624851 1594 ntBASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.88■□□□□ 0.93
RTCBQ9Y3I0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 KRT8P39-201ENST00000396270 1433 ntBASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTCBQ9Y3I0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms