Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 NUS1P2-201ENST00000417358 873 ntBASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 STK19B-204ENST00000512515 211 ntBASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 MIR5100-201ENST00000579544 119 ntBASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AC092364.2-201ENST00000596710 2692 ntBASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AC138894.3-201ENST00000603787 634 ntBASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AL591684.3-201ENST00000605187 298 ntBASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AL353593.2-201ENST00000602529 1483 ntBASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms