Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN1Q9UMX0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN1Q9UMX0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN1Q9UMX0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 KRT18P32-201ENST00000424695 1287 ntBASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 AC027307.2-201ENST00000591252 911 ntBASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN1Q9UMX0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AL512652.2-201ENST00000625156 1716 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AL139400.1-201ENST00000366220 510 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 HLA-J-202ENST00000469281 1241 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 HLA-J-203ENST00000494367 1087 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AC084121.4-201ENST00000641598 221 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 AF228730.8-201ENST00000642140 221 ntBASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBQLN1Q9UMX0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.46
UBQLN1Q9UMX0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBQLN1Q9UMX0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
UBQLN1Q9UMX0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
UBQLN1Q9UMX0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AL603756.1-201ENST00000606511 2163 ntBASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms