Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 FOXO1B-201ENST00000504678 1527 ntBASIC19.2■□□□□ 0.66
PNMA3Q9UL41 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PNMA3Q9UL41 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.19■□□□□ 0.66
PNMA3Q9UL41 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 TP53TG3HP-202ENST00000569755 579 ntBASIC19.19■□□□□ 0.66
PNMA3Q9UL41 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 SPTSSB-204ENST00000617024 1292 ntBASIC19.19■□□□□ 0.66
PNMA3Q9UL41 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.19■□□□□ 0.66
PNMA3Q9UL41 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 AL132655.2-201ENST00000596276 594 ntBASIC19.18■□□□□ 0.66
PNMA3Q9UL41 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.18■□□□□ 0.66
PNMA3Q9UL41 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PNMA3Q9UL41 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AC116353.5-201ENST00000638148 1699 ntBASIC19.17■□□□□ 0.66
PNMA3Q9UL41 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AL353779.1-201ENST00000434793 351 ntBASIC19.17■□□□□ 0.66
PNMA3Q9UL41 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AC140912.1-201ENST00000577171 1054 ntBASIC19.17■□□□□ 0.66
PNMA3Q9UL41 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.17■□□□□ 0.66
PNMA3Q9UL41 RN7SL828P-201ENST00000607615 303 ntBASIC19.17■□□□□ 0.66
PNMA3Q9UL41 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms