Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 TP53TG3HP-202ENST00000569755 579 ntBASIC21.2■□□□□ 0.99
SCN11AQ9UI33 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SCN11AQ9UI33 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 DGCR5-201ENST00000399539 862 ntBASIC21.2■□□□□ 0.98
SCN11AQ9UI33 EEF1DP4-201ENST00000446006 880 ntBASIC21.2■□□□□ 0.98
SCN11AQ9UI33 CR383656.12-201ENST00000549567 513 ntBASIC21.2■□□□□ 0.98
SCN11AQ9UI33 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 MIR4321-201ENST00000592276 80 ntBASIC21.2■□□□□ 0.98
SCN11AQ9UI33 AL109936.8-201ENST00000641772 604 ntBASIC21.2■□□□□ 0.98
SCN11AQ9UI33 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN11AQ9UI33 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 AC079776.1-201ENST00000401540 1152 ntBASIC21.19■□□□□ 0.98
SCN11AQ9UI33 U91328.1-201ENST00000437528 223 ntBASIC21.19■□□□□ 0.98
SCN11AQ9UI33 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 AC245100.5-201ENST00000452108 331 ntBASIC21.19■□□□□ 0.98
SCN11AQ9UI33 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 AC078925.2-201ENST00000624013 1973 ntBASIC21.19■□□□□ 0.98
SCN11AQ9UI33 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCN11AQ9UI33 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 PKD1P6-201ENST00000343738 4769 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 DFFBP1-201ENST00000433250 979 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AL365330.1-201ENST00000607459 531 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 SPDYE19P-201ENST00000338590 713 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AC055876.2-201ENST00000531834 546 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN11AQ9UI33 AC092337.1-201ENST00000568699 1129 ntBASIC21.18■□□□□ 0.98
SCN11AQ9UI33 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 SPDYE17-201ENST00000412399 783 ntBASIC21.17■□□□□ 0.98
SCN11AQ9UI33 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.17■□□□□ 0.98
SCN11AQ9UI33 SERBP1P3-201ENST00000459980 809 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms