Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MKS1Q9NXB0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.55■□□□□ 0.24
MKS1Q9NXB0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AC211429.1-201ENST00000415277 523 ntBASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AP002414.4-201ENST00000589764 1148 ntBASIC16.55■□□□□ 0.24
MKS1Q9NXB0 AL139424.1-201ENST00000607572 797 ntBASIC16.55■□□□□ 0.24
MKS1Q9NXB0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 LINC02447-202ENST00000501888 2146 ntBASIC16.55■□□□□ 0.24
MKS1Q9NXB0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MKS1Q9NXB0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.54■□□□□ 0.24
MKS1Q9NXB0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC069224.1-201ENST00000566372 1715 ntBASIC16.54■□□□□ 0.24
MKS1Q9NXB0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 FAM86EP-206ENST00000510506 987 ntBASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC116407.4-201ENST00000623319 1061 ntBASIC16.54■□□□□ 0.24
MKS1Q9NXB0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.54■□□□□ 0.24
MKS1Q9NXB0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.54■□□□□ 0.24
MKS1Q9NXB0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
MKS1Q9NXB0 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
MKS1Q9NXB0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MKS1Q9NXB0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MKS1Q9NXB0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms