Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC092053.1-201ENST00000605787 1936 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AGGF1P2-201ENST00000426656 2106 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AL031133.1-201ENST00000406807 723 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 CHCHD2P8-201ENST00000429873 447 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC011467.2-201ENST00000598425 242 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC010331.1-201ENST00000611423 582 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 AC024909.3-201ENST00000611513 2257 ntBASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 DBET-201ENST00000630918 3363 ntBASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 Z69720.1-201ENST00000601483 472 ntBASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AC091076.1-201ENST00000610741 619 ntBASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB16Q9NRJ7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms