Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSU72Q9NP77 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.65■□□□□ 0.26
SSU72Q9NP77 REXO1L8P-201ENST00000604378 1897 ntBASIC16.65■□□□□ 0.26
SSU72Q9NP77 PCGF3-213ENST00000620529 1899 ntBASIC16.65■□□□□ 0.26
SSU72Q9NP77 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSU72Q9NP77 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSU72Q9NP77 AC023824.1-201ENST00000562945 2975 ntBASIC16.65■□□□□ 0.26
SSU72Q9NP77 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.65■□□□□ 0.26
SSU72Q9NP77 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSU72Q9NP77 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSU72Q9NP77 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSU72Q9NP77 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSU72Q9NP77 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.64■□□□□ 0.26
SSU72Q9NP77 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
SSU72Q9NP77 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSU72Q9NP77 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 MPDU1-223ENST00000582151 728 ntBASIC16.64■□□□□ 0.25
SSU72Q9NP77 AL353135.1-201ENST00000606729 504 ntBASIC16.64■□□□□ 0.25
SSU72Q9NP77 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 AC097493.4-201ENST00000641197 219 ntBASIC16.64■□□□□ 0.25
SSU72Q9NP77 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSU72Q9NP77 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
SSU72Q9NP77 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
SSU72Q9NP77 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 MIR648-201ENST00000385046 94 ntBASIC16.63■□□□□ 0.25
SSU72Q9NP77 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 AL671277.2-201ENST00000458060 996 ntBASIC16.63■□□□□ 0.25
SSU72Q9NP77 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 AC010654.1-201ENST00000615722 808 ntBASIC16.63■□□□□ 0.25
SSU72Q9NP77 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 AC013268.4-201ENST00000637413 2228 ntBASIC16.63■□□□□ 0.25
SSU72Q9NP77 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SSU72Q9NP77 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSU72Q9NP77 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSU72Q9NP77 AC073347.1-201ENST00000421633 2643 ntBASIC16.62■□□□□ 0.25
SSU72Q9NP77 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 AC144831.1-201ENST00000573312 2656 ntBASIC16.62■□□□□ 0.25
SSU72Q9NP77 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.62■□□□□ 0.25
SSU72Q9NP77 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms