Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-2Q9C056 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 CICP20-201ENST00000443330 2801 ntBASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NKX6-2Q9C056 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 MFAP1P1-201ENST00000442257 1255 ntBASIC13.62□□□□□ -0.23
NKX6-2Q9C056 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 IKBKGP1-201ENST00000612193 1073 ntBASIC13.62□□□□□ -0.23
NKX6-2Q9C056 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 AC006486.2-201ENST00000624246 2199 ntBASIC13.62□□□□□ -0.23
NKX6-2Q9C056 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms