Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AC106794.1-201ENST00000506935 792 ntBASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AL022344.2-201ENST00000568976 968 ntBASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AC124283.3-201ENST00000570869 594 ntBASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 FTLP5-201ENST00000586853 534 ntBASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL25A1Q9BXS0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AL032819.2-201ENST00000624543 2162 ntBASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 DNM1P51-201ENST00000558149 522 ntBASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AC026979.3-201ENST00000607315 403 ntBASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 AC127024.7-201ENST00000625101 200 ntBASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL25A1Q9BXS0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC125437.2-201ENST00000625180 2167 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 NKAIN1P1-201ENST00000435754 582 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 FGFR3P1-201ENST00000449999 601 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 NOC2LP1-201ENST00000450578 752 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC234782.1-201ENST00000451950 919 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC093433.1-201ENST00000458048 571 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 ALG1L13P-202ENST00000519320 584 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 RN7SL774P-201ENST00000577467 290 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 EIF5AP2-201ENST00000585668 1047 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 AL158212.4-201ENST00000624062 1286 ntBASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL25A1Q9BXS0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms