Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL590326.2-201ENST00000625139 305 ntBASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 AP005117.1-201ENST00000584346 1413 ntBASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC005052.1-201ENST00000625181 2492 ntBASIC12.94□□□□□ -0.34
SHANK2-AS3Q9BTD1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 KRT16P4-201ENST00000453883 522 ntBASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 BX005266.1-201ENST00000473402 457 ntBASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 NPAP1P7-201ENST00000613027 823 ntBASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 AP000550.4-202ENST00000639755 178 ntBASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL022326.1-202ENST00000641533 845 ntBASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHANK2-AS3Q9BTD1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL365203.3-201ENST00000609742 2057 ntBASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL139424.1-201ENST00000607572 797 ntBASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AC069148.1-201ENST00000608741 768 ntBASIC12.92□□□□□ -0.34
SHANK2-AS3Q9BTD1 AP001269.4-201ENST00000609611 512 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms