Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC004832.2-201ENST00000426397 482 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC108073.2-201ENST00000464002 357 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 PGAM5P1-201ENST00000518923 814 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.07■□□□□ 0
USB1Q9BQ65 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.07■□□□□ 0
USB1Q9BQ65 MIR4751-201ENST00000578027 74 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.07■□□□□ 0
USB1Q9BQ65 MTDHP5-201ENST00000598980 586 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 AL590787.1-201ENST00000568856 1315 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
USB1Q9BQ65 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC002310.6-201ENST00000624451 1377 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC011676.5-201ENST00000624864 2660 ntBASIC15.07■□□□□ 0
USB1Q9BQ65 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
USB1Q9BQ65 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
USB1Q9BQ65 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.07■□□□□ 0
USB1Q9BQ65 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.07■□□□□ 0
USB1Q9BQ65 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
USB1Q9BQ65 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.06■□□□□ 0
USB1Q9BQ65 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.06■□□□□ 0
USB1Q9BQ65 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.06■□□□□ 0
USB1Q9BQ65 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC121493.1-201ENST00000602316 450 ntBASIC15.06■□□□□ 0
USB1Q9BQ65 AC064836.3-201ENST00000607928 673 ntBASIC15.06■□□□□ 0
USB1Q9BQ65 AC006538.3-201ENST00000612495 578 ntBASIC15.06■□□□□ 0
USB1Q9BQ65 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
USB1Q9BQ65 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.06■□□□□ 0
USB1Q9BQ65 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.06■□□□□ 0
USB1Q9BQ65 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USB1Q9BQ65 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USB1Q9BQ65 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.05■□□□□ 0
USB1Q9BQ65 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
USB1Q9BQ65 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
USB1Q9BQ65 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USB1Q9BQ65 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
USB1Q9BQ65 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.05■□□□□ 0
USB1Q9BQ65 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USB1Q9BQ65 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
USB1Q9BQ65 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
USB1Q9BQ65 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
USB1Q9BQ65 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms