Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HLA-A-202ENST00000376806 1854 ntBASIC17.52■□□□□ 0.39
SMOQ99835 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.52■□□□□ 0.39
SMOQ99835 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SMOQ99835 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMOQ99835 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMOQ99835 UBALD1-205ENST00000590891 2641 ntBASIC17.51■□□□□ 0.39
SMOQ99835 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.51■□□□□ 0.39
SMOQ99835 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.51■□□□□ 0.39
SMOQ99835 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.51■□□□□ 0.39
SMOQ99835 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.51■□□□□ 0.39
SMOQ99835 HLA-J-202ENST00000469281 1241 ntBASIC17.51■□□□□ 0.39
SMOQ99835 AC069335.1-201ENST00000489972 472 ntBASIC17.51■□□□□ 0.39
SMOQ99835 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.51■□□□□ 0.39
SMOQ99835 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.51■□□□□ 0.39
SMOQ99835 LTB4R2-202ENST00000528054 3092 ntBASIC17.51■□□□□ 0.39
SMOQ99835 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.51■□□□□ 0.39
SMOQ99835 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.51■□□□□ 0.39
SMOQ99835 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.51■□□□□ 0.39
SMOQ99835 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.51■□□□□ 0.39
SMOQ99835 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMOQ99835 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.51■□□□□ 0.39
SMOQ99835 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SMOQ99835 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.51■□□□□ 0.39
SMOQ99835 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
SMOQ99835 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMOQ99835 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
SMOQ99835 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.5■□□□□ 0.39
SMOQ99835 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 GGT4P-201ENST00000623672 1708 ntBASIC17.5■□□□□ 0.39
SMOQ99835 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.5■□□□□ 0.39
SMOQ99835 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 AGGF1P2-201ENST00000426656 2106 ntBASIC17.5■□□□□ 0.39
SMOQ99835 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 AL627223.1-201ENST00000416693 442 ntBASIC17.5■□□□□ 0.39
SMOQ99835 KRT18P34-201ENST00000488218 1270 ntBASIC17.5■□□□□ 0.39
SMOQ99835 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.5■□□□□ 0.39
SMOQ99835 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.5■□□□□ 0.39
SMOQ99835 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.5■□□□□ 0.39
SMOQ99835 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.5■□□□□ 0.39
SMOQ99835 FLJ38576-201ENST00000623820 2459 ntBASIC17.5■□□□□ 0.39
SMOQ99835 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.5■□□□□ 0.39
SMOQ99835 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
SMOQ99835 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMOQ99835 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.5■□□□□ 0.39
SMOQ99835 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 PCDHA12-202ENST00000613593 2588 ntBASIC17.49■□□□□ 0.39
SMOQ99835 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.49■□□□□ 0.39
SMOQ99835 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms