Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC6Q99741 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC6Q99741 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC6Q99741 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC6Q99741 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC6Q99741 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDC6Q99741 AL391825.1-201ENST00000457671 1364 ntBASIC16.13■□□□□ 0.17
CDC6Q99741 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CDC6Q99741 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.12■□□□□ 0.17
CDC6Q99741 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.12■□□□□ 0.17
CDC6Q99741 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 GIMAP3P-201ENST00000495150 836 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 AC011495.1-201ENST00000498085 584 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 PRYP6-201ENST00000514804 343 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 AL589739.1-201ENST00000607720 493 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 TEX28P1-201ENST00000613479 1221 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 TEX28P2-201ENST00000617764 1221 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDC6Q99741 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC6Q99741 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 EGFEM1P-202ENST00000431685 1563 ntBASIC16.12■□□□□ 0.17
CDC6Q99741 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC6Q99741 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC6Q99741 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC6Q99741 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC6Q99741 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC6Q99741 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC6Q99741 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.11■□□□□ 0.17
CDC6Q99741 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AP006294.1-201ENST00000415407 339 ntBASIC16.11■□□□□ 0.17
CDC6Q99741 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.11■□□□□ 0.17
CDC6Q99741 MTND6P24-201ENST00000440466 518 ntBASIC16.11■□□□□ 0.17
CDC6Q99741 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC6Q99741 API5-211ENST00000534695 560 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 AC009407.1-201ENST00000568958 598 ntBASIC16.11■□□□□ 0.17
CDC6Q99741 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 CYP2A7P1-201ENST00000595391 815 ntBASIC16.11■□□□□ 0.17
CDC6Q99741 AC017083.2-201ENST00000608069 979 ntBASIC16.11■□□□□ 0.17
CDC6Q99741 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC6Q99741 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC6Q99741 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms