Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PKP4Q99569 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PKP4Q99569 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 RHOQP3-201ENST00000437982 621 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 PCDHA14-201ENST00000506751 2298 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP4Q99569 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.32■□□□□ 0.2
PKP4Q99569 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 AC018845.2-201ENST00000568326 409 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 MIR4515-201ENST00000584082 81 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP4Q99569 AL139011.1-202ENST00000642063 584 ntBASIC16.32■□□□□ 0.2
PKP4Q99569 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP4Q99569 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PKP4Q99569 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
PKP4Q99569 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.31■□□□□ 0.2
PKP4Q99569 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.31■□□□□ 0.2
PKP4Q99569 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.31■□□□□ 0.2
PKP4Q99569 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.31■□□□□ 0.2
PKP4Q99569 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.31■□□□□ 0.2
PKP4Q99569 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 AC140113.2-201ENST00000604370 208 ntBASIC16.31■□□□□ 0.2
PKP4Q99569 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
PKP4Q99569 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP4Q99569 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PKP4Q99569 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PKP4Q99569 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP4Q99569 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
PKP4Q99569 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 KRT8P39-201ENST00000396270 1433 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 AL022342.1-201ENST00000400363 863 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.3■□□□□ 0.2
PKP4Q99569 HLA-J-202ENST00000469281 1241 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 AC027601.4-201ENST00000611259 610 ntBASIC16.3■□□□□ 0.2
PKP4Q99569 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms