Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRRC3BQ96PB8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 AC139713.2-201ENST00000641328 2723 ntBASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 COX5BP8-201ENST00000416911 349 ntBASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 RN7SL692P-201ENST00000464677 288 ntBASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 HLA-J-202ENST00000469281 1241 ntBASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 CR383656.12-201ENST00000549567 513 ntBASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC3BQ96PB8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 AC004790.1-201ENST00000612686 536 ntBASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRRC3BQ96PB8 FZD10-202ENST00000539839 3282 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms