Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AL133215.2-201ENST00000609242 977 ntBASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 AC073439.1-201ENST00000624121 1774 ntBASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NECTIN4Q96NY8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 SPDYE19P-201ENST00000338590 713 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC079776.1-201ENST00000401540 1152 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 SLC25A6P5-201ENST00000435663 894 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 SERBP1P3-201ENST00000459980 809 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 KRT17P8-201ENST00000540749 863 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC132938.2-201ENST00000579188 680 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AC008494.3-201ENST00000606615 944 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AL591163.1-201ENST00000641757 987 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 ABALON-201ENST00000629058 1903 ntBASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
NECTIN4Q96NY8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 AC093525.9-201ENST00000624961 1746 ntBASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 BANF1P1-201ENST00000553684 263 ntBASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NECTIN4Q96NY8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AL023806.1-201ENST00000603994 1649 ntBASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms