Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.46□□□□□ -0.09
CMTM3Q96MX0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CMTM3Q96MX0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CMTM3Q96MX0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CMTM3Q96MX0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 AC008550.1-201ENST00000511500 884 ntBASIC14.45□□□□□ -0.1
CMTM3Q96MX0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 LINC01144-201ENST00000626198 1710 ntBASIC14.45□□□□□ -0.1
CMTM3Q96MX0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMTM3Q96MX0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms