Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 AMT-206ENST00000458307 1860 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 DNAJB3-202ENST00000449667 1266 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 SPDYE11-202ENST00000450699 704 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 TIMM8BP1-201ENST00000452384 211 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 AL135744.1-201ENST00000565098 629 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 SPDYE9P-201ENST00000570642 692 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 SPDYE10P-202ENST00000612005 668 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 SPDYE8P-202ENST00000612377 668 ntBASIC22.35■■□□□ 1.17
CFAP53Q96M91 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
CFAP53Q96M91 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP53Q96M91 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC078925.2-201ENST00000624013 1973 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC006538.1-201ENST00000567905 1585 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC016027.1-202ENST00000607927 1699 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AP000344.2-201ENST00000512987 629 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 SNHG9-202ENST00000564014 471 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC105339.1-204ENST00000636249 355 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AC022211.2-201ENST00000585075 2527 ntBASIC22.34■■□□□ 1.17
CFAP53Q96M91 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.34■■□□□ 1.17
CFAP53Q96M91 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP53Q96M91 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 AL513210.1-201ENST00000629608 234 ntBASIC22.33■■□□□ 1.17
CFAP53Q96M91 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.33■■□□□ 1.17
CFAP53Q96M91 AL512652.2-201ENST00000625156 1716 ntBASIC22.33■■□□□ 1.17
CFAP53Q96M91 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CFAP53Q96M91 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CFAP53Q96M91 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CFAP53Q96M91 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.33■■□□□ 1.16
CFAP53Q96M91 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms