Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.03■□□□□ 0.16
ITCHQ96J02 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.03■□□□□ 0.16
ITCHQ96J02 MTHFR-217ENST00000641820 1569 ntBASIC16.03■□□□□ 0.16
ITCHQ96J02 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.03■□□□□ 0.16
ITCHQ96J02 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.02■□□□□ 0.16
ITCHQ96J02 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 IER3-202ENST00000376377 1350 ntBASIC16.02■□□□□ 0.16
ITCHQ96J02 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.02■□□□□ 0.16
ITCHQ96J02 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ITCHQ96J02 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.02■□□□□ 0.16
ITCHQ96J02 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.02■□□□□ 0.16
ITCHQ96J02 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.02■□□□□ 0.16
ITCHQ96J02 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 AP000867.3-201ENST00000524675 377 ntBASIC16.02■□□□□ 0.16
ITCHQ96J02 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.02■□□□□ 0.16
ITCHQ96J02 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.02■□□□□ 0.16
ITCHQ96J02 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.02■□□□□ 0.16
ITCHQ96J02 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITCHQ96J02 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ITCHQ96J02 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
ITCHQ96J02 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ITCHQ96J02 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.02■□□□□ 0.15
ITCHQ96J02 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ITCHQ96J02 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ITCHQ96J02 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ITCHQ96J02 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.02■□□□□ 0.15
ITCHQ96J02 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ITCHQ96J02 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.01■□□□□ 0.15
ITCHQ96J02 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ITCHQ96J02 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 AL590787.1-201ENST00000568856 1315 ntBASIC16.01■□□□□ 0.15
ITCHQ96J02 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ITCHQ96J02 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ITCHQ96J02 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.01■□□□□ 0.15
ITCHQ96J02 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.01■□□□□ 0.15
ITCHQ96J02 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 AC012615.1-201ENST00000565797 1299 ntBASIC16.01■□□□□ 0.15
ITCHQ96J02 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 MIR5100-201ENST00000579544 119 ntBASIC16.01■□□□□ 0.15
ITCHQ96J02 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.01■□□□□ 0.15
ITCHQ96J02 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 AL353135.1-201ENST00000606729 504 ntBASIC16.01■□□□□ 0.15
ITCHQ96J02 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.01■□□□□ 0.15
ITCHQ96J02 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ITCHQ96J02 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ITCHQ96J02 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms