Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCD1Q96GM5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMARCD1Q96GM5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 AC080080.1-201ENST00000625121 2420 ntBASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.58■□□□□ 0.41
SMARCD1Q96GM5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 HLA-J-202ENST00000469281 1241 ntBASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 AC079140.1-201ENST00000508039 487 ntBASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 AC243562.1-201ENST00000560672 389 ntBASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.58■□□□□ 0.4
SMARCD1Q96GM5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AC092183.1-201ENST00000469884 875 ntBASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 KRT18P34-201ENST00000488218 1270 ntBASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AC006538.1-201ENST00000567905 1585 ntBASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.57■□□□□ 0.4
SMARCD1Q96GM5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 OR6D1P-203ENST00000641209 4860 ntBASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AL512652.2-201ENST00000625156 1716 ntBASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms