Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 COX11P1-201ENST00000489116 835 ntBASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 AC109462.3-201ENST00000573934 613 ntBASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 AC004263.2-201ENST00000617183 678 ntBASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP6Q96FZ7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP6Q96FZ7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AC113347.1-201ENST00000413321 391 ntBASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AL138966.2-201ENST00000621997 464 ntBASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AL031432.5-201ENST00000641059 760 ntBASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 AC097374.2-201ENST00000618617 1306 ntBASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms